Pharmacogenomic (PGx) testing and the MTHFR test: what genes can and cannot say

BPR Clinic20 October 20265 min readLer em português

A once-in-a-lifetime DNA test can show how your body may handle some common medicines. The MTHFR test is a different story. A calm guide to both.

Tests in this article:Pharmacogenomic Test,MTHFR COMMON VARIANTS

Two people take the same tablet at the same dose. One feels the benefit; the other notices little effect, or more side effects. Age, other medicines and health conditions all play a part, and so do genes. Pharmacogenomic testing looks at that last piece.

This guide explains what the pharmacogenomic (PGx) test in the BPR catalogue measures, how the results are meant to be used, and why the MTHFR test, which often appears next to it, deserves a more cautious reading.

What pharmacogenomic testing is

Pharmacogenomics studies how inherited differences in our genes affect the way we respond to medicines, both how well they work and how safe they are. Differences in drug response between people are common, and genes are one of the reasons. As genetic testing becomes more widely available, health systems in many countries are working out how to bring it into everyday prescribing (Pirmohamed, 2023).

Many of these genes code for enzymes, mostly in the liver, that switch medicines on or break them down. If an enzyme works faster or slower than usual, the amount of active medicine in the body can be different from what the standard dose expects.

A clear example: CYP2C19 and clopidogrel

Clopidogrel is a medicine used to reduce the stickiness of platelets. It needs to be activated by an enzyme called CYP2C19. An international guideline explains that people whose CYP2C19 gene makes them "intermediate" or "poor" metabolisers form less of the active drug, have reduced platelet inhibition and a higher risk of cardiovascular and cerebrovascular events while on clopidogrel (Lee et al., 2022).

In the UK, NICE has published guidance on CYP2C19 genotype testing to guide clopidogrel use after an ischaemic stroke or transient ischaemic attack (NICE DG59). It is one of the clearest cases where a gene result changes a prescribing decision.

What the LML pharmacogenomic test covers

According to LML, the Pharmacogenomic Test:

  • uses a saliva sample collected at home with a kit;
  • covers over 78 commonly prescribed medicines across areas such as mental health, pain and cardiovascular care;
  • supports personalised prescribing for clopidogrel, in line with NICE guidance;
  • is UKCA marked and registered with the MHRA;
  • comes with a report written for you and your healthcare provider;
  • has results about 30 days after the sample reaches the laboratory.

Because your genes do not change, LML describes it as a one-time test with results you can use for life. That matches the general guidance for this topic: usually done once, ideally with a professional who can explain how it fits your situation.

How to use a PGx result safely

A pharmacogenomic report is information for your prescriber, not an instruction for you. Please do not stop, start or change the dose of any medicine because of a PGx result. Take the report to your GP, pharmacist or specialist, who can weigh it alongside your other medicines, kidney and liver function, and the reason the medicine was prescribed.

It also helps to know the limits. A PGx test looks at specific genes. It does not measure how well a medicine is working for you today, and a "normal" result does not mean a medicine will suit you perfectly. Implementation in health systems is still developing, and many clinicians are still becoming familiar with these reports (Pirmohamed, 2023).

The MTHFR test

MTHFR is a gene that codes for an enzyme involved in folate metabolism. The LML MTHFR Common Variants test is a blood test that looks for two common variants, C677T and A1298C. LML lists associations reported for the C677T variant, sometimes called the thermolabile allele, with vascular conditions and with some conditions in pregnancy.

Here the wider evidence calls for caution. The American College of Medical Genetics and Genomics reviewed MTHFR testing and concluded that the variants have minimal clinical usefulness and that the test should not be ordered as part of a routine assessment for blood clotting tendency (thrombophilia). The guideline also notes that meta-analyses did not confirm the links once proposed with heart disease and blood clots (Hickey et al., 2013). In 2020 the College published an addendum to this guideline (Bashford et al., 2020).

In practice, this means the MTHFR test is best requested with a clear reason and a professional to interpret it. LML asks for clinical history with the request and states that results take about three weeks.

PGx and MTHFR are not the same kind of test

Both tests read DNA, so they are often grouped together. The questions they answer are very different. The PGx test asks: how is my body likely to handle certain medicines? The MTHFR test asks whether two specific variants are present, and on its own that answer has limited use in day-to-day care. If you are choosing between them, start with the question you want answered.

How the sample is collected

BPR does not take samples. Collection is done by LML. The PGx test uses a home saliva kit. The MTHFR test needs a blood sample, taken at an LML collection point that you find by postcode or by a phlebotomist at your home. The test page in the BPR catalogue shows the options. Anyone under 18 attends the collection point with an adult. Questions about our catalogue can go to [email protected], the form on the website or the app.

Frequently asked questions

Do I need to repeat a pharmacogenomic test? Generally no. Your genes do not change, and LML describes the PGx test as a one-time test. Speak to a professional about how and when to use the report.

Can I change my medicine based on my PGx report? No. Share the report with your prescriber or pharmacist, who can decide whether any change is appropriate.

Should I take the MTHFR test to check my risk of blood clots? Professional guidance advises against MTHFR testing as part of a routine clotting assessment. If you have a family history or concerns, talk to your GP first.

References

  1. Pirmohamed M. Nat Rev Genet. 2023;24(6):350-362. PMID 36707729
  2. Lee CR, et al. Clin Pharmacol Ther. 2022;112(5):959-967. PMID 35034351
  3. CYP2C19 genotype testing to guide clopidogrel use after ischaemic stroke or transient ischaemic attack. nice.org.uk
  4. Hickey SE, Curry CJ, Toriello HV. Genet Med. 2013;15(2):153-6. PMID 23288205
  5. Bashford MT, et al. Genet Med. 2020;22(12):2125. PMID 32533132

The tests in this article

Analysed by London Medical Laboratory. Choose a home kit, an LML collection point or a phlebotomist at home.

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This article is for general information and education only and is not a substitute for an individual assessment or treatment by a qualified healthcare professional. If you have significant, worsening or concerning symptoms, please seek advice from a suitably qualified clinician.